compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

Dependency Tree

• cz.zcu.mre:anonmed:jar:2024.11

  AnonMed
  Description: AnonMed is a non-interactive rules-based heterogeneous data de-identification tool. It is simple to use from command line. AnonMed can be even used for anonymiation purposes or making files blind, which depends on the file format. Debian package contains command anonmed. URL: https://mre.zcu.cz/anonmed Project Licenses: GPLv3

  • cz.zcu.mre:mrelib:jar:2024.11 (compile)

    MRE Library
    Description: MRE Library is shared and commonly used library by other MRE modules. URL: https://mre.zcu.cz/mrelib Project Licenses: GPLv3

    • cz.zcu.mre:ontology:jar:2024.11 (compile)

      MRE Ontology
      Description: Ontologies and Vocabularies used by MRE project. Contain generated Java code for ontology resources and properties. URL: https://mre.zcu.cz/ontology Project Licenses: GPLv3

    • org.apache.jena:apache-jena-libs:pom:5.2.0 (compile)

      Apache Jena - Libraries POM
      Description: A POM artifact that references all the standard Jena Libraries with a single dependency. URL: https://jena.apache.org/apache-jena-libs/ Project Licenses: The Apache Software License, Version 2.0

      • org.apache.jena:jena-rdfpatch:jar:5.2.0 (compile)

        Apache Jena - RDF Patch

        Description: The Apache Software Foundation provides support for the Apache community of open-source software projects. The Apache projects are characterized by a collaborative, consensus based development process, an open and pragmatic software license, and a desire to create high quality software that leads the way in its field. We consider ourselves not simply a group of projects sharing a server, but rather a community of developers and users. URL: https://jena.apache.org/jena-rdfpatch/ Project Licenses: The Apache Software License, Version 2.0

        • org.apache.jena:jena-arq:jar:5.2.0 (compile)

          Apache Jena - ARQ
          Description: SPARQL 1.1 query engine and RDF parsers for Apache Jena URL: https://jena.apache.org/jena-arq/ Project Licenses: The Apache Software License, Version 2.0

          • org.apache.jena:jena-core:jar:5.2.0 (compile)

            Apache Jena - Core
            Description: Jena is a Java framework for building Semantic Web applications. It provides a programmatic environment for RDF, RDFS and OWL, SPARQL and includes a rule-based inference engine. URL: https://jena.apache.org/jena-core/ Project Licenses: The Apache Software License, Version 2.0

            • org.apache.jena:jena-base:jar:5.2.0 (compile)

              Apache Jena - Base
              Description: This module contains non-RDF library code and the common system runtime. URL: https://jena.apache.org/jena-base/ Project Licenses: The Apache Software License, Version 2.0

              • com.github.ben-manes.caffeine:caffeine:jar:3.1.8 (compile)

                Caffeine cache
                Description: A high performance caching library URL: https://github.com/ben-manes/caffeine Project Licenses: Apache License, Version 2.0

              • com.github.andrewoma.dexx:collection:jar:0.7 (compile)

                dexx
                Description: Persistent (immutable) collection library URL: https://github.com/andrewoma/dexx Project Licenses: MIT License

            • org.apache.jena:jena-iri:jar:5.2.0 (compile)

              Apache Jena - IRI
              Description: The IRI module provides an implementation of the IRI and URI specifications (RFC 3987 and 3986) which are used across Jena in order to comply with relevant W3C specifications for RDF and SPARQL which require conformance to these specifications. URL: https://jena.apache.org/jena-iri/ Project Licenses: The Apache Software License, Version 2.0

            • org.roaringbitmap:RoaringBitmap:jar:1.3.0 (compile)

              org.roaringbitmap:RoaringBitmap
              Description: Roaring bitmaps are compressed bitmaps (also called bitsets) which tend to outperform conventional compressed bitmaps such as WAH or Concise. URL: https://github.com/RoaringBitmap/RoaringBitmap Project Licenses: Apache 2

          • com.google.code.gson:gson:jar:2.11.0 (compile)

            Gson
            Description: Gson JSON library URL: https://github.com/google/gson Project Licenses: Apache-2.0

            • com.google.errorprone:error_prone_annotations:jar:2.27.0 (compile)

              error-prone annotations
              Description: Error Prone is a static analysis tool for Java that catches common programming mistakes at compile-time. URL: https://errorprone.info/error_prone_annotations Project Licenses: Apache 2.0

          • com.apicatalog:titanium-json-ld:jar:1.4.1 (compile)

            Titanium JSON-LD 1.1 (JRE11)
            Description: A JSON-LD 1.1 Processor & API URL: https://github.com/filip26/titanium-json-ld Project Licenses: Apache License, Version 2.0

          • org.glassfish:jakarta.json:jar:2.0.1 (compile)

            JSON-P Default Provider
            Description: Default provider for Jakarta JSON Processing URL: https://github.com/eclipse-ee4j/jsonp Project Licenses: Eclipse Public License 2.0, GNU General Public License, version 2 with the GNU Classpath Exception

          • com.google.protobuf:protobuf-java:jar:4.28.2 (compile)

            Protocol Buffers [Core]
            Description: Core Protocol Buffers library. Protocol Buffers are a way of encoding structured data in an efficient yet extensible format. URL: https://developers.google.com/protocol-buffers/protobuf-java/ Project Licenses: BSD-3-Clause

          • org.apache.thrift:libthrift:jar:0.21.0 (compile)

            Apache Thrift
            Description: Thrift is a software framework for scalable cross-language services development. URL: http://thrift.apache.org Project Licenses: The Apache Software License, Version 2.0

      • org.apache.jena:jena-ontapi:jar:5.2.0 (compile)

        Apache Jena - ONTAPI
        Description: Ontology API for Apache Jena URL: https://jena.apache.org/jena-ontapi/ Project Licenses: The Apache Software License, Version 2.0

      • org.apache.jena:jena-shacl:jar:5.2.0 (compile)

        Apache Jena - SHACL
        Description: SHACL engine for Apache Jena URL: https://jena.apache.org/jena-shacl/ Project Licenses: The Apache Software License, Version 2.0

      • org.apache.jena:jena-shex:jar:5.2.0 (compile)

        Apache Jena - ShEx
        Description: ShEx URL: https://jena.apache.org/jena-shex/ Project Licenses: The Apache Software License, Version 2.0

      • org.apache.jena:jena-tdb1:jar:5.2.0 (compile)

        Apache Jena - TDB1 (Native Triple Store)
        Description: TDB is a storage subsystem for Jena and ARQ, it is a native triple store providing persistent storage of triples/quads. URL: https://jena.apache.org/jena-tdb1/ Project Licenses: The Apache Software License, Version 2.0

      • org.apache.jena:jena-tdb2:jar:5.2.0 (compile)

        Apache Jena - TDB2 (Native Triple Store)

        Description: The Apache Software Foundation provides support for the Apache community of open-source software projects. The Apache projects are characterized by a collaborative, consensus based development process, an open and pragmatic software license, and a desire to create high quality software that leads the way in its field. We consider ourselves not simply a group of projects sharing a server, but rather a community of developers and users. URL: https://jena.apache.org/jena-tdb2/ Project Licenses: The Apache Software License, Version 2.0

        • org.apache.jena:jena-dboe-storage:jar:5.2.0 (compile)

          Apache Jena - DBOE Storage
          Description: Triplestore database storage URL: https://jena.apache.org/jena-dboe-storage/ Project Licenses: Apache License 2.0

          • org.apache.jena:jena-dboe-trans-data:jar:5.2.0 (compile)

            Apache Jena - DBOE Transactional Datastructures

            Description: The Apache Software Foundation provides support for the Apache community of open-source software projects. The Apache projects are characterized by a collaborative, consensus based development process, an open and pragmatic software license, and a desire to create high quality software that leads the way in its field. We consider ourselves not simply a group of projects sharing a server, but rather a community of developers and users. URL: https://jena.apache.org/jena-dboe-trans-data/ Project Licenses: Apache License 2.0

            • org.apache.jena:jena-dboe-transaction:jar:5.2.0 (compile)

              Apache Jena - DBOE Transactions

              Description: The Apache Software Foundation provides support for the Apache community of open-source software projects. The Apache projects are characterized by a collaborative, consensus based development process, an open and pragmatic software license, and a desire to create high quality software that leads the way in its field. We consider ourselves not simply a group of projects sharing a server, but rather a community of developers and users. URL: https://jena.apache.org/jena-dboe-transaction/ Project Licenses: Apache License 2.0

              • org.apache.jena:jena-dboe-base:jar:5.2.0 (compile)

                Apache Jena - DBOE Base

                Description: The Apache Software Foundation provides support for the Apache community of open-source software projects. The Apache projects are characterized by a collaborative, consensus based development process, an open and pragmatic software license, and a desire to create high quality software that leads the way in its field. We consider ourselves not simply a group of projects sharing a server, but rather a community of developers and users. URL: https://jena.apache.org/jena-dboe-base/ Project Licenses: Apache License 2.0

            • org.apache.jena:jena-dboe-index:jar:5.2.0 (compile)

              Apache Jena - DBOE Indexes

              Description: The Apache Software Foundation provides support for the Apache community of open-source software projects. The Apache projects are characterized by a collaborative, consensus based development process, an open and pragmatic software license, and a desire to create high quality software that leads the way in its field. We consider ourselves not simply a group of projects sharing a server, but rather a community of developers and users. URL: https://jena.apache.org/jena-dboe-index/ Project Licenses: Apache License 2.0

      • org.apache.jena:jena-rdfconnection:jar:5.2.0 (compile)

        Apache Jena - RDF Connection
        Description: RDF Connection URL: https://jena.apache.org/jena-rdfconnection/ Project Licenses: Apache 2.0 License

    • com.openlink.virtuoso:virtuoso-jdbc43:jar:3.123 (compile)

      virtuoso-jdbc43
      Description: POM was created from install:install-file Project Licenses: No licenses are defined for this project.

    • com.openlink.virtuoso:virtuoso-jena4:jar:1.42 (compile)

      virtuoso-jena4
      Description: POM was created from install:install-file Project Licenses: No licenses are defined for this project.

    • org.reflections:reflections:jar:0.10.2 (compile)

      Reflections
      Description: Reflections - Java runtime metadata analysis URL: http://github.com/ronmamo/reflections Project Licenses: WTFPL, The Apache Software License, Version 2.0

      • org.javassist:javassist:jar:3.28.0-GA (compile)

        Javassist
        Description: Javassist (JAVA programming ASSISTant) makes Java bytecode manipulation simple. It is a class library for editing bytecodes in Java. URL: http://www.javassist.org/ Project Licenses: MPL 1.1, LGPL 2.1, Apache License 2.0

      • com.google.code.findbugs:jsr305:jar:3.0.2 (compile)

        FindBugs-jsr305
        Description: JSR305 Annotations for Findbugs URL: http://findbugs.sourceforge.net/ Project Licenses: The Apache Software License, Version 2.0

    • org.apache.tika:tika-core:jar:3.0.0 (compile)

      Apache Tika core
      Description: This is the core Apache Tika™ toolkit library from which all other modules inherit functionality. It also includes the core facades for the Tika API. URL: https://tika.apache.org/ Project Licenses: Apache-2.0

    • xml-apis:xml-apis:jar:1.4.01 (compile)

      XML Commons External Components XML APIs

      Description: xml-commons provides an Apache-hosted set of DOM, SAX, and JAXP interfaces for use in other xml-based projects. Our hope is that we can standardize on both a common version and packaging scheme for these critical XML standards interfaces to make the lives of both our developers and users easier. The External Components portion of xml-commons contains interfaces that are defined by external standards organizations. For DOM, that's the W3C; for SAX it's David Megginson and sax.sourceforge.net; for JAXP it's Sun. URL: http://xml.apache.org/commons/components/external/ Project Licenses: The Apache Software License, Version 2.0, The SAX License, The W3C License

    • javax.xml.bind:jaxb-api:jar:2.4.0-b180830.0359 (compile)

      jaxb-api
      Description: JAXB (JSR 222) API URL: https://github.com/javaee/jaxb-spec/jaxb-api Project Licenses: CDDL 1.1, GPL2 w/ CPE

      • javax.activation:javax.activation-api:jar:1.2.0 (compile)

        JavaBeans Activation Framework API jar
        Description: JavaBeans Activation Framework API jar URL: http://java.net/all/javax.activation-api/ Project Licenses: CDDL/GPLv2+CE

    • org.apache.httpcomponents:httpclient:jar:4.5.14 (compile)

      Apache HttpClient
      Description: Apache HttpComponents Client URL: http://hc.apache.org/httpcomponents-client-ga Project Licenses: Apache License, Version 2.0

      • org.apache.httpcomponents:httpcore:jar:4.4.16 (compile)

        Apache HttpCore
        Description: Apache HttpComponents Core (blocking I/O) URL: http://hc.apache.org/httpcomponents-core-ga Project Licenses: Apache License, Version 2.0

      • commons-logging:commons-logging:jar:1.2 (compile)

        Apache Commons Logging
        Description: Apache Commons Logging is a thin adapter allowing configurable bridging to other, well known logging systems. URL: http://commons.apache.org/proper/commons-logging/ Project Licenses: The Apache Software License, Version 2.0

    • org.bouncycastle:bcprov-jdk15on:jar:1.70 (compile)

      Bouncy Castle Provider
      Description: The Bouncy Castle Crypto package is a Java implementation of cryptographic algorithms. This jar contains JCE provider and lightweight API for the Bouncy Castle Cryptography APIs for JDK 1.5 and up. URL: https://www.bouncycastle.org/java.html Project Licenses: Bouncy Castle Licence

    • org.bouncycastle:bcpkix-jdk15on:jar:1.70 (compile)

      Bouncy Castle PKIX, CMS, EAC, TSP, PKCS, OCSP, CMP, and CRMF APIs
      Description: The Bouncy Castle Java APIs for CMS, PKCS, EAC, TSP, CMP, CRMF, OCSP, and certificate generation. This jar contains APIs for JDK 1.5 and up. The APIs can be used in conjunction with a JCE/JCA provider such as the one provided with the Bouncy Castle Cryptography APIs. URL: https://www.bouncycastle.org/java.html Project Licenses: Bouncy Castle Licence

      • org.bouncycastle:bcutil-jdk15on:jar:1.70 (compile)

        Bouncy Castle ASN.1 Extension and Utility APIs
        Description: The Bouncy Castle Java APIs for ASN.1 extension and utility APIs used to support bcpkix and bctls. This jar contains APIs for JDK 1.5 and up. URL: https://www.bouncycastle.org/java.html Project Licenses: Bouncy Castle Licence

  • commons-cli:commons-cli:jar:1.9.0 (compile)

    Apache Commons CLI
    Description: Apache Commons CLI provides a simple API for presenting, processing, and validating a Command Line Interface. URL: https://commons.apache.org/proper/commons-cli/ Project Licenses: Apache-2.0

  • org.apache.commons:commons-csv:jar:1.12.0 (compile)

    Apache Commons CSV
    Description: The Apache Commons CSV library provides a simple interface for reading and writing CSV files of various types. URL: https://commons.apache.org/proper/commons-csv/ Project Licenses: Apache-2.0

    • commons-io:commons-io:jar:2.17.0 (compile)

      Apache Commons IO
      Description: The Apache Commons IO library contains utility classes, stream implementations, file filters, file comparators, endian transformation classes, and much more. URL: https://commons.apache.org/proper/commons-io/ Project Licenses: Apache-2.0

    • commons-codec:commons-codec:jar:1.17.1 (compile)

      Apache Commons Codec
      Description: The Apache Commons Codec component contains encoders and decoders for various formats such as Base16, Base32, Base64, digest, and Hexadecimal. In addition to these widely used encoders and decoders, the codec package also maintains a collection of phonetic encoding utilities. URL: https://commons.apache.org/proper/commons-codec/ Project Licenses: Apache-2.0

  • org.apache.commons:commons-lang3:jar:3.17.0 (compile)

    Apache Commons Lang

    Description: Apache Commons Lang, a package of Java utility classes for the classes that are in java.lang's hierarchy, or are considered to be so standard as to justify existence in java.lang. The code is tested using the latest revision of the JDK for supported LTS releases: 8, 11, 17 and 21 currently. See https://github.com/apache/commons-lang/blob/master/.github/workflows/maven.yml Please ensure your build environment is up-to-date and kindly report any build issues. URL: https://commons.apache.org/proper/commons-lang/ Project Licenses: Apache-2.0

  • org.jdom:jdom2:jar:2.0.6.1 (compile)

    JDOM
    Description: A complete, Java-based solution for accessing, manipulating, and outputting XML data URL: http://www.jdom.org Project Licenses: Similar to Apache License but with the acknowledgment clause removed

  • jaxen:jaxen:jar:2.0.0 (compile)

    jaxen
    Description: Jaxen is a universal XPath engine for Java. URL: http://www.cafeconleche.org/jaxen/jaxen Project Licenses: BSD License 2.0

  • org.dcm4che:dcm4che-core:jar:5.33.0 (compile)

    dcm4che-core
    Description: DICOM Data Structures and Encoding Project Licenses: Mozilla Public License Version 1.1 or later, GNU General Public License v2 or later, GNU Lesser General Public License v2.1 or later

    • org.dcm4che:dcm4che-dict:jar:5.33.0 (compile)

      dcm4che-dict
      Description: Generate XML Element and UID Dictionary from DICOM Part 6 and 7 Project Licenses: Mozilla Public License Version 1.1 or later, GNU General Public License v2 or later, GNU Lesser General Public License v2.1 or later

  • org.dcm4che:dcm4che-imageio:jar:5.33.0 (compile)

    dcm4che-imageio
    Description: dcm4che DICOM toolkit and utilities Project Licenses: Mozilla Public License Version 1.1 or later, GNU General Public License v2 or later, GNU Lesser General Public License v2.1 or later

    • org.dcm4che:dcm4che-image:jar:5.33.0 (compile)

      dcm4che-image
      Description: dcm4che DICOM toolkit and utilities Project Licenses: Mozilla Public License Version 1.1 or later, GNU General Public License v2 or later, GNU Lesser General Public License v2.1 or later

  • org.apache.poi:poi:jar:5.3.0 (compile)

    Apache POI - Common
    Description: Apache POI - Java API To Access Microsoft Format Files URL: https://poi.apache.org/ Project Licenses: Apache License, Version 2.0

    • org.apache.commons:commons-collections4:jar:4.4 (compile)

      Apache Commons Collections
      Description: The Apache Commons Collections package contains types that extend and augment the Java Collections Framework. URL: https://commons.apache.org/proper/commons-collections/ Project Licenses: Apache License, Version 2.0

    • org.apache.commons:commons-math3:jar:3.6.1 (compile)

      Apache Commons Math
      Description: The Apache Commons Math project is a library of lightweight, self-contained mathematics and statistics components addressing the most common practical problems not immediately available in the Java programming language or commons-lang. URL: http://commons.apache.org/proper/commons-math/ Project Licenses: Apache License, Version 2.0

    • com.zaxxer:SparseBitSet:jar:1.3 (compile)

      SparseBitSet
      Description: An efficient sparse bitset implementation for Java URL: https://github.com/brettwooldridge/SparseBitSet Project Licenses: The Apache Software License, Version 2.0

    • org.apache.logging.log4j:log4j-api:jar:2.23.1 (compile)

      Apache Log4j API
      Description: The Apache Log4j API URL: https://logging.apache.org/log4j/2.x/log4j/log4j-api/ Project Licenses: Apache-2.0

  • org.apache.poi:poi-ooxml:jar:5.3.0 (compile)

    Apache POI - API based on OPC and OOXML schemas
    Description: Apache POI - Java API To Access Microsoft Format Files URL: https://poi.apache.org/ Project Licenses: Apache License, Version 2.0

    • org.apache.poi:poi-ooxml-lite:jar:5.3.0 (compile)

      Apache POI
      Description: Apache POI - Java API To Access Microsoft Format Files URL: https://poi.apache.org/ Project Licenses: Apache License, Version 2.0

    • org.apache.xmlbeans:xmlbeans:jar:5.2.1 (compile)

      XmlBeans
      Description: XmlBeans main jar URL: https://xmlbeans.apache.org/ Project Licenses: The Apache Software License, Version 2.0

    • org.apache.commons:commons-compress:jar:1.26.2 (compile)

      Apache Commons Compress
      Description: Apache Commons Compress defines an API for working with compression and archive formats. These include bzip2, gzip, pack200, LZMA, XZ, Snappy, traditional Unix Compress, DEFLATE, DEFLATE64, LZ4, Brotli, Zstandard and ar, cpio, jar, tar, zip, dump, 7z, arj. URL: https://commons.apache.org/proper/commons-compress/ Project Licenses: Apache-2.0

    • com.github.virtuald:curvesapi:jar:1.08 (compile)

      curvesapi
      Description: Implementation of various mathematical curves that define themselves over a set of control points. The API is written in Java. The curves supported are: Bezier, B-Spline, Cardinal Spline, Catmull-Rom Spline, Lagrange, Natural Cubic Spline, and NURBS. URL: https://github.com/virtuald/curvesapi Project Licenses: BSD License

  • org.slf4j:slf4j-api:jar:2.1.0-alpha1 (compile)

    SLF4J API Module
    Description: The slf4j API URL: http://www.slf4j.org Project Licenses: MIT License

  • org.slf4j:slf4j-simple:jar:2.1.0-alpha1 (compile)

    SLF4J Simple Provider
    Description: SLF4J Simple Provider URL: http://www.slf4j.org Project Licenses: MIT License

  • junit:junit:jar:4.13.2 (test)

    JUnit
    Description: JUnit is a unit testing framework for Java, created by Erich Gamma and Kent Beck. URL: http://junit.org Project Licenses: Eclipse Public License 1.0

    • org.hamcrest:hamcrest-core:jar:1.3 (test)

      Hamcrest Core
      Description: This is the core API of hamcrest matcher framework to be used by third-party framework providers. This includes the a foundation set of matcher implementations for common operations. URL: https://github.com/hamcrest/JavaHamcrest/hamcrest-core Project Licenses: New BSD License

  • xerces:xercesImpl:jar:2.12.2 (compile)

    Xerces2-j

    Description: Xerces2 provides high performance, fully compliant XML parsers in the Apache Xerces family. This new version of Xerces continues to build upon the Xerces Native Interface (XNI), a complete framework for building parser components and configurations that is extremely modular and easy to program. The Apache Xerces2 parser is the reference implementation of XNI but other parser components, configurations, and parsers can be written using the Xerces Native Interface. For complete design and implementation documents, refer to the XNI Manual. Xerces2 provides fully conforming XML Schema 1.0 and 1.1 processors. An experimental implementation of the "XML Schema Definition Language (XSD): Component Designators (SCD) Candidate Recommendation (January 2010)" is also provided for evaluation. For more information, refer to the XML Schema page. Xerces2 also provides a complete implementation of the Document Object Model Level 3 Core and Load/Save W3C Recommendations and provides a complete implementation of the XML Inclusions (XInclude) W3C Recommendation. It also provides support for OASIS XML Catalogs v1.1. Xerces2 is able to parse documents written according to the XML 1.1 Recommendation, except that it does not yet provide an option to enable normalization checking as described in section 2.13 of this specification. It also handles namespaces according to the XML Namespaces 1.1 Recommendation, and will correctly serialize XML 1.1 documents if the DOM level 3 load/save APIs are in use. URL: https://xerces.apache.org/xerces2-j/ Project Licenses: The Apache Software License, Version 2.0