Project Dependencies

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

GroupId ArtifactId Version Type Licenses
commons-io commons-io 2.17.0 jar Apache-2.0
cz.zcu.mre metamed-extractor 2024.11 jar GPLv3
cz.zcu.mre metamed-extractor-dasta 2024.11 jar GPLv3
jaxen jaxen 2.0.0 jar BSD License 2.0
org.apache.commons commons-csv 1.12.0 jar Apache-2.0
org.apache.commons commons-text 1.12.0 jar Apache-2.0
org.slf4j slf4j-api 2.1.0-alpha1 jar MIT License
org.slf4j slf4j-simple 2.1.0-alpha1 jar MIT License
xerces xercesImpl 2.12.2 jar The Apache Software License, Version 2.0

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

GroupId ArtifactId Version Type Licenses
junit junit 4.13.2 jar Eclipse Public License 1.0

Project Transitive Dependencies

The following is a list of transitive dependencies for this project. Transitive dependencies are the dependencies of the project dependencies.

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

GroupId ArtifactId Version Type Licenses
com.apicatalog titanium-json-ld 1.4.1 jar Apache License, Version 2.0
com.github.andrewoma.dexx collection 0.7 jar MIT License
com.github.ben-manes.caffeine caffeine 3.1.8 jar Apache License, Version 2.0
com.google.code.findbugs jsr305 3.0.2 jar The Apache Software License, Version 2.0
com.google.code.gson gson 2.11.0 jar Apache-2.0
com.google.errorprone error_prone_annotations 2.27.0 jar Apache 2.0
com.google.protobuf protobuf-java 4.28.2 jar BSD-3-Clause
com.openlink.virtuoso virtuoso-jdbc43 3.123 jar -
com.openlink.virtuoso virtuoso-jena4 1.42 jar -
commons-cli commons-cli 1.9.0 jar Apache-2.0
commons-codec commons-codec 1.17.1 jar Apache-2.0
commons-logging commons-logging 1.2 jar The Apache Software License, Version 2.0
cz.zcu.mre mrelib 2024.11 jar GPLv3
cz.zcu.mre ontology 2024.11 jar GPLv3
javax.activation javax.activation-api 1.2.0 jar CDDL/GPLv2+CE
javax.xml.bind jaxb-api 2.4.0-b180830.0359 jar CDDL 1.1GPL2 w/ CPE
org.apache.commons commons-collections4 4.4 jar Apache License, Version 2.0
org.apache.commons commons-compress 1.27.1 jar Apache-2.0
org.apache.commons commons-lang3 3.14.0 jar Apache-2.0
org.apache.httpcomponents httpclient 4.5.14 jar Apache License, Version 2.0
org.apache.httpcomponents httpcore 4.4.16 jar Apache License, Version 2.0
org.apache.jena apache-jena-libs 5.2.0 pom The Apache Software License, Version 2.0
org.apache.jena jena-arq 5.2.0 jar The Apache Software License, Version 2.0
org.apache.jena jena-base 5.2.0 jar The Apache Software License, Version 2.0
org.apache.jena jena-core 5.2.0 jar The Apache Software License, Version 2.0
org.apache.jena jena-dboe-base 5.2.0 jar Apache License 2.0
org.apache.jena jena-dboe-index 5.2.0 jar Apache License 2.0
org.apache.jena jena-dboe-storage 5.2.0 jar Apache License 2.0
org.apache.jena jena-dboe-trans-data 5.2.0 jar Apache License 2.0
org.apache.jena jena-dboe-transaction 5.2.0 jar Apache License 2.0
org.apache.jena jena-iri 5.2.0 jar The Apache Software License, Version 2.0
org.apache.jena jena-ontapi 5.2.0 jar The Apache Software License, Version 2.0
org.apache.jena jena-rdfconnection 5.2.0 jar Apache 2.0 License
org.apache.jena jena-rdfpatch 5.2.0 jar The Apache Software License, Version 2.0
org.apache.jena jena-shacl 5.2.0 jar The Apache Software License, Version 2.0
org.apache.jena jena-shex 5.2.0 jar The Apache Software License, Version 2.0
org.apache.jena jena-tdb1 5.2.0 jar The Apache Software License, Version 2.0
org.apache.jena jena-tdb2 5.2.0 jar The Apache Software License, Version 2.0
org.apache.thrift libthrift 0.21.0 jar The Apache Software License, Version 2.0
org.apache.tika tika-core 3.0.0 jar Apache-2.0
org.bouncycastle bcpkix-jdk15on 1.70 jar Bouncy Castle Licence
org.bouncycastle bcprov-jdk15on 1.70 jar Bouncy Castle Licence
org.bouncycastle bcutil-jdk15on 1.70 jar Bouncy Castle Licence
org.glassfish jakarta.json 2.0.1 jar Eclipse Public License 2.0GNU General Public License, version 2 with the GNU Classpath Exception
org.javassist javassist 3.28.0-GA jar MPL 1.1LGPL 2.1Apache License 2.0
org.jdom jdom 2.0.2 jar Similar to Apache License but with the acknowledgment clause removed
org.jdom jdom2 2.0.6.1 jar Similar to Apache License but with the acknowledgment clause removed
org.reflections reflections 0.10.2 jar WTFPLThe Apache Software License, Version 2.0
org.roaringbitmap RoaringBitmap 1.3.0 jar Apache 2
xml-apis xml-apis 1.4.01 jar The Apache Software License, Version 2.0The SAX LicenseThe W3C License

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

GroupId ArtifactId Version Type Licenses
org.hamcrest hamcrest-core 1.3 jar New BSD License

Project Dependency Graph

Dependency Tree

  • cz.zcu.mre:metamed-extractor-stroke:jar:2024.11 [Information]
    • cz.zcu.mre:metamed-extractor:jar:2024.11 (compile) [Information]
    • cz.zcu.mre:metamed-extractor-dasta:jar:2024.11 (compile) [Information]
    • jaxen:jaxen:jar:2.0.0 (compile) [Information]
    • xerces:xercesImpl:jar:2.12.2 (compile) [Information]
      • xml-apis:xml-apis:jar:1.4.01 (compile) [Information]
    • org.apache.commons:commons-csv:jar:1.12.0 (compile) [Information]
      • commons-codec:commons-codec:jar:1.17.1 (compile) [Information]
    • commons-io:commons-io:jar:2.17.0 (compile) [Information]
    • org.apache.commons:commons-text:jar:1.12.0 (compile) [Information]
      • org.apache.commons:commons-lang3:jar:3.14.0 (compile) [Information]
    • org.slf4j:slf4j-api:jar:2.1.0-alpha1 (compile) [Information]
    • org.slf4j:slf4j-simple:jar:2.1.0-alpha1 (compile) [Information]
    • junit:junit:jar:4.13.2 (test) [Information]
      • org.hamcrest:hamcrest-core:jar:1.3 (test) [Information]

Licenses

Eclipse Public License 2.0: JSON-P Default Provider

Apache 2.0: error-prone annotations

Eclipse Public License 1.0: JUnit

MIT License: SLF4J API Module, SLF4J Simple Provider, dexx

GPL2 w/ CPE: jaxb-api

New BSD License: Hamcrest Core

GPLv3: MRE Library, MRE Ontology, MetaMed Extractor, MetaMed Extractor DASTA, MetaMed Extractor Stroke

CDDL/GPLv2+CE: JavaBeans Activation Framework API jar

Apache 2: org.roaringbitmap:RoaringBitmap

Similar to Apache License but with the acknowledgment clause removed: JDOM

Unknown: virtuoso-jdbc43, virtuoso-jena4

Apache License 2.0: Apache Jena - DBOE Base, Apache Jena - DBOE Indexes, Apache Jena - DBOE Storage, Apache Jena - DBOE Transactional Datastructures, Apache Jena - DBOE Transactions, Javassist

Apache-2.0: Apache Commons CLI, Apache Commons CSV, Apache Commons Codec, Apache Commons Compress, Apache Commons IO, Apache Commons Lang, Apache Commons Text, Apache Tika core, Gson

Apache License, Version 2.0: Apache Commons Collections, Apache HttpClient, Apache HttpCore, Caffeine cache, Titanium JSON-LD 1.1 (JRE11)

MPL 1.1: Javassist

CDDL 1.1: jaxb-api

The SAX License: XML Commons External Components XML APIs

BSD-3-Clause: Protocol Buffers [Core]

The W3C License: XML Commons External Components XML APIs

Bouncy Castle Licence: Bouncy Castle ASN.1 Extension and Utility APIs, Bouncy Castle PKIX, CMS, EAC, TSP, PKCS, OCSP, CMP, and CRMF APIs, Bouncy Castle Provider

WTFPL: Reflections

GNU General Public License, version 2 with the GNU Classpath Exception: JSON-P Default Provider

Apache 2.0 License: Apache Jena - RDF Connection

LGPL 2.1: Javassist

The Apache Software License, Version 2.0: Apache Commons Logging, Apache Jena - ARQ, Apache Jena - Base, Apache Jena - Core, Apache Jena - IRI, Apache Jena - Libraries POM, Apache Jena - ONTAPI, Apache Jena - RDF Patch, Apache Jena - SHACL, Apache Jena - ShEx, Apache Jena - TDB1 (Native Triple Store), Apache Jena - TDB2 (Native Triple Store), Apache Thrift, FindBugs-jsr305, Reflections, XML Commons External Components XML APIs, Xerces2-j

BSD License 2.0: jaxen

Dependency File Details

Filename Size Entries Classes Packages Java Version Debug Information
titanium-json-ld-1.4.1.jar 300.1 kB 181 146 26 11 Yes
collection-0.7.jar 165 kB 147 134 6 1.6 Yes
caffeine-3.1.8.jar 889.2 kB 713 704 3 11 Yes
jsr305-3.0.2.jar 19.9 kB 46 35 3 1.5 Yes
gson-2.11.0.jar 298.4 kB 244 - - - -
   • Root - 243 223 9 1.7 Yes
   • Versioned - 1 1 1 9 No
error_prone_annotations-2.27.0.jar 19.4 kB 47 - - - -
   • Root - 40 27 2 1.8 Yes
   • Versioned - 7 1 1 9 No
protobuf-java-4.28.2.jar 1.8 MB 754 734 2 1.8 Yes
virtuoso-jdbc43-3.123.jar 323.7 kB 103 99 4 9 Yes
virtuoso-jena4-1.42.jar 77.6 kB 30 25 1 11 Yes
commons-cli-1.9.0.jar 75.5 kB 51 - - - -
   • Root - 50 37 1 1.8 Yes
   • Versioned - 1 1 1 9 No
commons-codec-1.17.1.jar 372.7 kB 262 - - - -
   • Root - 261 114 7 1.8 Yes
   • Versioned - 1 1 1 9 No
commons-io-2.17.0.jar 516 kB 378 - - - -
   • Root - 377 350 15 1.8 Yes
   • Versioned - 1 1 1 9 No
commons-logging-1.2.jar 61.8 kB 42 28 2 1.2 Yes
metamed-extractor-2024.11.jar 15.2 kB 20 7 1 17 Yes
metamed-extractor-dasta-2024.11.jar 17.8 kB 19 3 1 17 Yes
mrelib-2024.11.jar 79.7 kB 63 44 6 17 Yes
ontology-2024.11.jar 420.1 kB 52 38 1 17 Yes
javax.activation-api-1.2.0.jar 56.7 kB 41 31 1 1.5 Yes
jaxb-api-2.4.0-b180830.0359.jar 128 kB 136 - - - -
   • Root - 131 111 7 1.7 Yes
   • Versioned - 5 1 1 9 No
jaxen-2.0.0.jar 224 kB 233 209 16 1.5 Yes
junit-4.13.2.jar 384.6 kB 389 350 32 1.5 Yes
commons-collections4-4.4.jar 751.9 kB 555 524 19 1.8 Yes
commons-compress-1.27.1.jar 1.1 MB 625 - - - -
   • Root - 624 572 36 1.8 Yes
   • Versioned - 1 1 1 9 No
commons-csv-1.12.0.jar 56.6 kB 33 - - - -
   • Root - 32 19 1 1.8 Yes
   • Versioned - 1 1 1 9 No
commons-lang3-3.14.0.jar 658 kB 436 - - - -
   • Root - 434 403 18 1.8 Yes
   • Versioned - 2 1 1 9 No
commons-text-1.12.0.jar 251.2 kB 181 - - - -
   • Root - 180 160 8 1.8 Yes
   • Versioned - 1 1 1 9 No
httpclient-4.5.14.jar 785.6 kB 511 470 24 1.6 Yes
httpcore-4.4.16.jar 327.9 kB 283 253 17 1.6 Yes
apache-jena-libs-5.2.0.pom 2.8 kB - - - - -
jena-arq-5.2.0.jar 4 MB 2472 2335 121 17 Yes
jena-base-5.2.0.jar 261.2 kB 208 184 11 17 Yes
jena-core-5.2.0.jar 2 MB 1357 1243 62 17 Yes
jena-dboe-base-5.2.0.jar 139 kB 104 81 10 17 Yes
jena-dboe-index-5.2.0.jar 17.2 kB 25 10 1 17 Yes
jena-dboe-storage-5.2.0.jar 37.9 kB 38 20 4 17 Yes
jena-dboe-trans-data-5.2.0.jar 101.6 kB 55 37 3 17 Yes
jena-dboe-transaction-5.2.0.jar 85.1 kB 69 52 3 17 Yes
jena-iri-5.2.0.jar 138.6 kB 74 59 2 17 Yes
jena-ontapi-5.2.0.jar 616.1 kB 393 369 9 17 Yes
jena-rdfconnection-5.2.0.jar 72.6 kB 52 37 2 17 Yes
jena-rdfpatch-5.2.0.jar 131.5 kB 113 90 8 17 Yes
jena-shacl-5.2.0.jar 367.1 kB 210 179 13 17 Yes
jena-shex-5.2.0.jar 233.9 kB 129 106 8 17 Yes
jena-tdb1-5.2.0.jar 543.7 kB 357 314 28 17 Yes
jena-tdb2-5.2.0.jar 319.7 kB 189 155 19 17 Yes
libthrift-0.21.0.jar 360.5 kB 276 258 12 1.8 Yes
tika-core-3.0.0.jar 776.6 kB 507 452 36 11 Yes
bcpkix-jdk15on-1.70.jar 963.7 kB 862 - - - -
   • Root - 860 803 50 1.5 No
   • Versioned - 2 1 1 9 No
bcprov-jdk15on-1.70.jar 5.9 MB 4576 - - - -
   • Root - 3631 3465 148 1.5 No
   • Versioned - 879 805 63 9 Yes
   • Versioned - 39 32 1 11 Yes
   • Versioned - 27 20 1 15 Yes
bcutil-jdk15on-1.70.jar 482.5 kB 443 - - - -
   • Root - 441 413 20 1.5 No
   • Versioned - 2 1 1 9 No
jakarta.json-2.0.1.jar 143.8 kB 114 96 6 1.8 Yes
hamcrest-core-1.3.jar 45 kB 52 45 3 1.5 Yes
javassist-3.28.0-GA.jar 851.5 kB 474 426 17 1.8 Yes
jdom-2.0.2.jar 295.4 kB 208 188 15 1.5 Yes
jdom2-2.0.6.1.jar 327.8 kB 227 207 15 1.5 Yes
reflections-0.10.2.jar 130.4 kB 87 74 5 1.8 Yes
RoaringBitmap-1.3.0.jar 459.3 kB 191 - - - -
   • Root - 187 178 6 1.8 Yes
   • Versioned - 4 1 1 9 Yes
slf4j-api-2.1.0-alpha1.jar 70.9 kB 73 - - - -
   • Root - 71 57 4 1.8 Yes
   • Versioned - 2 1 1 9 No
slf4j-simple-2.1.0-alpha1.jar 15.9 kB 23 - - - -
   • Root - 21 7 1 1.8 Yes
   • Versioned - 2 1 1 9 No
xercesImpl-2.12.2.jar 1.4 MB 1045 962 40 1.7 No
xml-apis-1.4.01.jar 220.5 kB 391 346 29 1.1 No
Total Size Entries Classes Packages Java Version Debug Information
61 31.7 MB 21969 19098 980 17 55
compile: 59 compile: 31.3 MB compile: 21528 compile: 18703 compile: 945 17 compile: 53
test: 2 test: 429.6 kB test: 441 test: 395 test: 35 1.5 test: 2